1. Baršienė J., Butrimavičienė L., Grygiel W., Lang L, Michailovas A., Jackūnas T. 2014. Environmental genotoxicity and cytotoxicity in herring (Clupea harengus), Atlantic cod (Gadus morhua) and flounder (Platichthys flesus) inhabiting dumped chemical munitions zones in the southern Baltic Sea (2010-2012). Marine Environmental Research, 96: 56-67. 
2. Turja R., Höher N., Snoeijs P., Baršienė J.,  Butrimavičienė L., Kuznetsova T., Kholodkevich S., Devier M-H., Budzinski H., Lehtonen K. 2014. A multibiomarker approach to the assessment of pollution impacts in two Baltic Sea coastal arkas in Sweden using ceged mussels (Mytilus trossulus). Science of the Total Environment, 473-474: 398-409.
3. Hansson T., Baršienė J., Tjärnlund U., Åkerman G., Linderoth M., Zebühr Y.,  Sternbeck  J., Järnberg U., Broeg K., Köhler A., Balk L. 2014. Cytological and biochemical biomarkers in adult female perch  (Perca fluviatilis) in a chronically polluted gradient in the Stockholm recipient (Sweden). Marine Pollution Bulletin,
4. Kreitsberg R., Baršienė J., Freiberg R., Andreikėnaitė L., Tammaru T., Rumvolt K. and Tuvikene A. 2013. Effects of hypoxia and contaminated sediments on the gibel carp (Carassius auratus gibelio) in laboratory exposure based on multiple biomarkers. Ecotoxicology and Environmental Safety, 98: 227-235. http://dx.doi:10.1016/j.ecoenv.2013.08.016
5. Baršienė J., Rybakovas A., Lang T., Andreikėnaitė L., Michailovas A. 2013. Environmental genotoxicity and cytotoxicity levels in fish from the North Sea offshore and Atlantic coastal waters. Marine Pollution Bulletin, 68: 106-116. http://dx.doi.10.1016/j.marpolbul.2012.12.011
6. Robinson C.D., MacNeish K., Webster L., Baršienė J., Butrimavičienė L., Bignell J., Katsiadaki I., Sebire M., Gubbins M. 2013. An assessment of contaminants and their biological effects in Scottish flastfish. Proceedings of 23rd Annual Meeting of the Society of Environmental Toxicology and Chemistry (SETAC) Europe, 12-16th May 2013, Glasgow, UK, 05/2013. 
7. Baršienė J., Rybakovas A., Garnaga G., Andreikėnaitė L. 2012.  Environmental genotoxicity and cytotoxicity studies in mussels before and after the oil spill in marine oil terminal (Baltic Sea). Environmental Monitoring and Assessment, 184: 2067-2078; http://dx.doi: 10.1007/s10661-011-2100-0.
8. Baršienė J., Rybakovas A., Lang T., Grygiel W., Andreikėnaitė L., Michailovas A. 2012.  Risk of environmental genotoxicity in the Baltic Sea over the period of 2009–2011 assessed by micronuclei frequencies in blood erythrocytes of flounder (Platichthys flesus), herring (Clupea harengus) and eelpout (Zoarces viviparus). Marine Environmental Research, 77: 35-42, http://dx.doi: 10.1016/j.marenvres.2012.01.004.
9. Hansson T., Barsiene J., Schiedek D., Vourinen P.J., Tjarnlund U., Linderoth M., Zebuhr Y., Broeg K., Kohler A., Balk L. 2012. Biomarkers in female perch (Perce fluviatilis) in the Stockholm recipient. Toxicology Letters, 211S: S47. http://dx.doi:10.1016/j.toxlet.2012.03.338
10. Kreitsberg R., Tuvikene A., Baršienė J., Fricke N. F., Rybakovas A., Andreikėnaitė L., Rumvolt K. and Vilbaste S. 2012. Biomarkers of environmental contaminants in the coastal waters of Estonia (Baltic Sea): effects on eelpout (Zoarces viviparus). Journal of Environmental Monitoring., 14: 2298-2308. http://dx.doi:10.1039/C2EM30285C.
11. Baršienė J., Lyons B., Rybakovas A., Martinez-Gomez C., Andreikėnaitė L., Brooks S., Maes T. 2012. Background document: micronucleus assay as a tool for assessing cytogenetic/DNA damage in marine organisms. ICES Cooperative Research Report No 315 “Integrated marine environmental monitoring of chemicals and their effects”: 71- 83.
12. Brooks S.J., Harman C., Grung M., Farmen E., Ruus A., Vingen S., Godal B.F., Baršienė J., Andreikėnaitė L., Skarphedinsdottir H., Liewenborg B., Sundt R.C. 2011. Water column monitoringo f the biological effects of produced water from the Ekofisk offshore oil installation from 2006 to 2009. Journal of Toxicology and Environmental Health, Part A, 74: 1-23.
13. Sundt R.C., Pampanin D.M., Grung M., Baršienė J., Ruus A. 2011. PAH body burden and biomarker respoonses in mussels (Mytilus edulis) exposed to produced water from a North Sea oil field: Laboratory and field assessments. Marine Pollution Bulletin, 62: 1498-1505.
14. Vosylienė M. Z., Kazlauskienė N., Baršienė J., Andreikėnaitė L., Milukaitė A., Taujanskis E. 2010. Ecotoxicity and genotoxicity relating to fish in wastewaters discharged from the Vilnius treatment plant. Water Science & Technology—WST Vol 62 No 4 pp 859–865, http://dx.doi:10.2166/wst.2010.916.
15. Skarphedinsdottir H., Hallgrimsson G.T, Hansson T., Hägerroth P.-A., Liewenborg B., Tjärnlund U., Åkerman G., Baršienė J., Balk L. 2010. Genotoxicity in herring gulls (Larus argentatus) in Sweden and Iceland. Mutation Research/ Genetic Toxicology and Environmental Mutagenesis, 702 (1):24-31.
16. Pampanin D.M., Ravagnan E., Apeland S., Aarab N., Godal B.F., Westerlung S.,  Hjermann D.O., Eftestol T., Budka M., Gabrys B., Viarengo A., Barsiene J. 2010. The marine environment I.Q. concept: Developing an index of the quality of the marine environment based on biomarkers: Integration of pollutant effects on marine organisms. Comp. Biochem. and Physiol. – Part A: Molecular and Integrative Physiology, 157, Suppl 1, S52.
17. Baršienė J., Bjornstad A., Rybakovas A., Šyvokienė J., Andreikėnaitė L. 2010. Environmental genotoxicity and cytotoxicity studies in mussels and fish inhabiting northern Atlantic zones impacted by aluminum industry. Ekologija, 56, 3-4: 116-123.
18. Baršienė J., Bjornstad A., Andreikėnaitė L. 2010. Induction of micronuclei and other nuclear abnormalities in blue mussels Mytilus edulis after 1-, 2-, 4- and 8-day treatment with crude oil from the North Sea. Ekologija, 56, 3-4: 124-131.
19. Napierska D., Baršienė, J., Mulkiewicz E., Podolska M., Rybakovas A. 2009.  Biomarker responses in flounder Platichthys flesus from the Polish coastal area of the Baltic Sea and application in biomonitoring. Ecotoxicology, 18: 846-859.
20. Rybakovas A., Baršienė J., Lang T. 2009. Environmental genotoxicity and cytotoxicity in the offshore zones of the Baltic and the North Seas. Marine Environmental Research, 68: 246-256.
21. Baršienė J., Andreikėnaitė L., Vosylienė M. Z., Milukaitė A. 2009. Genotoxicity and immunotoxicity of wastewater effluents discharged from Vilnius wastewater treatment plant. Acta Zoologica Lituanica, 19 (3): 188-197.
22. Baršienė J., Andreikėnaitė L., Garnaga G., Rybakovas A. 2008. Genotoxic and cytotoxic effects in bivalve mollusks Macoma balthica and Mytilus edulis from the Baltic Sea. Ekologija, 54: 44-50.
23. Baršienė J. 2008. Baltijos jūros tarša. Biota ir globali kaita, II, Vilnius, 2008: 67-76.
24. Baršienė J. 2008. Baltijos jūros taršos genotoksiniai efektai. Biota ir globali kaita, II, Vilnius, 2008: 77-90.
25. Hylland K., Tollefsen K.-E., Ruus A., Jonsson G., Sundt R.C., Sanni S., Utvik T.I.R., Johnsen S., Nilssen I., Pinturier L., Balk L., Baršienė J., Marigòmez I., Feist S., Børseth J.F. 2008. Water column monitoring near oil installations in the North Sea 2001-2004. Marine Pollution Bulletin, 56: 414-429.
26. Baršienė J., Andreikėnaitė L., Garnaga G., Rybakovas A. 2008. Genotoxic and cytotoxic effects in bivalve mollusks Macoma balthica and Mytilus edulis from the Baltic Sea. Ekologija, 54: 44-50.
27. Baršienė J., Rybakovas A. 2008. Cytogenetic damage in the gill and gonad cells of bivalve mollusks. Ekologija, No 4: 245-250
28. Baršienė J., Rybakovas A., Förlin L., Šyvokienė J. 2008. Environmental genotoxicity studies in mussels and fish from Göteborg area of the North Sea. Acta Zoologica Lituanica, 2008, No 4: 240-247.
29. Šyvokienė J., Mickėnienė L., Baršienė J. 2008. Bacteria in the digestive system of molluscs from Lithuanian lakes. Ekologija, 54, 4: 271–277.
30. Andreikėnaitė L., Baršienė, J., Vosylienė M.Z. 2007. Studies of micronuclei and other nuclear abnormalitiers in blood of rainbow trout (Oncorhynchus mykiss) treated with heavy metal mixture and road maintenence salts. Acta Zoologica Lituanica, 17, No 3: 213-219.
31. Baršienė J., Andreikėnaitė L. 2007. Induction of micronuclei and other nuclear abnormalities in blue mussels exposed to crude oil from the North Sea. Ekologija, 53, No 3: 9-15.
32. Baršienė J.,  Andreikėnaitė L., Rybakovas A. 2006a. Cytogenetic damage in perch (Perca fluviatilis L.) and Duck mussel (Anodonta anatina L.) exposed to crude oil. Ekologija No 1: 25-31.
33. Baršienė J., Dedonytė V., Rybakovas A., Andreikėnaitė L., Andersen O.K. 2006b. Investigation of micronuclei and other nuclear abnormalities in peripheral blood and kidney of marine fish treated with crude oil. Aquatic Toxicology,78, Supplement 1: 99-104.
34. Baršienė J., Šyvokienė J., Bjornstad A. 2006c. Induction of micronuclei and other nuclear abnormalities in mussels exposed to bisphenol A, diallyl phthalate and tetrabromodiphenyl ether-47. Aquatic Toxicology, 78, Supplement 1: 105-108.
35. Baršienė J., Schiedek D., Rybakovas A., Šyvokienė J., Kopecka J., Forlin L. 2006d. Cytogenetic and cytotoxic effects in gill cells of the blue mussel Mytilus spp. from different zones of the Baltic Sea. Marine Pollution Bulletin, 53: 469-478.
36. Baršienė J., Lehtonen K., Koehler A., Broeg K., Vourinen P.J., Lang T., Pempkowiak J.,  Šyvokienė J., Dedonytė V., Rybakovas A., Repečka R., Vountisjarvi H., Kopecka J. 2006e. Biomarker responses in flounder (Platichthys flesus) and mussel (Mytilus edulis) in the Klaipėda-Būtingė area (Baltic Sea). Marine Pollution Bulletin, 53: 422-436.
37. Schiedek D., Broeg K., Baršienė J., Lehtonen K.K., Gercken J., Pfeifer S., Vountisjarvi H., Vuorinen P.J. , Dedonytė V., Koehler A., Balk L., Schneider R. 2006. Biomarker responses as indication of contaminant effects in blue mussel (Mytilus edulis) and female eelpout (Zoarces viviparus) from the south-western Baltic Sea. Marine Pollution Bulletin, 53: 387-405.
38. Vourinen P.J., Keinanen M., Vountisjarvi H., Baršienė J., Broeg K., Forlin L., Gercken J., Kopecka J., Koehler A., Parkkonen J., Pempkowiak J., Schiedek D. 2006. Use of bile PAH metabolites as a biomarker of pollution in fish from the Baltic Sea. Marine Pollution Bulletin, 53: 479-487.
39. Kopecka J., Lehtonen K., Baršienė J., Broeg K., Vuorinen P.J., Gercken J., Pempkowiak J. 2006. Measurements of biomarker levels in flounder (Platichthys flesus)  and mussel (Mytilus trossulus) from the Gulf of Gdańsk (southern Baltic). Marine Pollution Bulletin, 53: 406-421.
40. Lang  T., Wosniok W., Baršienė J., Broeg K., Kopecka J., Parkkonen J. 2006. Liver histopathology in Baltic flounder (Platichthys flesus) as indicator of biological effects of contaminants. Marine Pollution Bulletin, 53: 488-496.
41. Lehtonen K.K., Schiedek D., Koehler A., Lang T., Vuorinen P.J., Förlin L., Baršienė J., Pempkowiak J., Gercken J. 2006. The BEEP project in the Baltic Sea: overview of results and outline for a regional biological effects monitoring strategy. Marine Pollution Bulletin, 53: 523-537.
42. Baršienė J. 2006. Relevance of micronucleus test for the mutagenicity assessment in marine environment. Marine Environmental Research, 62: S306-307.
43. Baršienė J., Rybakovas A., Broeg K., Schiedek D., Lang T.,  Forlin L., Pemkowiak J., Gercken J., Balk L. 2006f. Micronuclei in fish and mussels from different sites of the Baltic Sea. Marine Environmental Research, 62: S315-316.
44. Baršienė J.,  Rybakovas A. 2006. Cytogenetic and cytotoxic effects in gill cells of the blue mussel Mytilus edulis from the Baltic coast and after 1-3-day maintenance in laboratory. Acta Zool. Lithuanica, 16: 191-197.
45. Baršienė J., Dedonytė V., Rybakovas A., Broeg K., Forlin L. , Gercken J., Kopecka J., Balk L. 2005a.  Environmental mutagenesis in different zones of the Baltic Sea. Acta Zoologica Lituanica, 15: 90-95. 
46. Baršienė J., Dedonytė V., Rybakovas A., Andreikėnaitė L., Andersen O.K. 2005b. Induction of micronuclei in Atlantic cod (Gadus morhua) and turbot (Scophthalmus maximus) after treatment with bisphenol A, diallyl phthalate and tetrabromodiphenyl ether-47. Ekologija, No 4: 1-7.
47. Bagni G., Baussant T., Jonsson G., Baršienė J., Mascini M. 2005. Electrochemical device for the rapid detection of genotoxic compounds in fish bile samples. Analytical Letters, 38: 2639-2652.
48. Četkauskaitė A., Baršienė J., Vosylienė M.-Z., Svecevičius G., Šyvokienė J., Lekevičius R., Petrauskienė L., Paškauskas R.,  Beržinskienė J., Mickėnienė L., Bučinskienė R. 2005. Toxicity of sediments and water of the Curonian Lagoon and the lower reaches of the Nemunas River. NATO/CCMS 2005. Modeling Nutrient Loads and Responses in River and Estuary Systems. Report No. 271. R.C. Russo (Ed.), Committee on the Challenges of Modern Society, North Atlantic Treaty Organization, Brussels, p 12-26.
49. Baršienė J., Lazutka J., Šyvokienė J., Dedonytė V., Rybakovas A., Bagdonas E., Bjornstad A., Andersen O.K. 2004. Analysis of micronuclei in blue mussels and fish from the Baltic and North Seas. Environmental Toxicology, 19: 365-371.
50. Kopecka J., Rybakovas A., Baršienė J., Pempkowiak J. 2004. AChE levels in mussels and fish collected off Lithuania and Poland (southern Baltic). Oceanologia, 46: 405-418.
51. Baršienė J., Bučinskienė R. 2002. Cytogenetic damage in indigenous and deployed molluscs. Marine Environmental Research, 54, 3-5: 536.
52. Baršienė J., Bučinskienė R., Jokšas K. 2002. Cytogenetic damage and heavy metal bioaccumulation in molluscs inhabiting different sites of the Neris River. Ekologija, 2: 52-57.
53. Baršienė J. 2002. Genotoxic impacts in Klaipėda port and Būtingė oil terminal areas (Baltic Sea). Marine Environmental Research, 54, 3-5: 475-479.
54. Baršienė J., Bučinskienė R. 2001. Cytogenetic damage in the tissues of indigenous and transferred molluscs. Acta Zoologica Lituanica, 11, 1:102-109.
55. Baršienė J, Baršytė D. 2000. Studies of genotoxic effects in artificial freshwater basin. Acta Hydrobiologica Lituanica, 11: 91-104.
56. Baršienė J, Baršytė Lovejoy D. 2000. Peculiarities of environmental genotoxicity in Klaipėda port area. International Review of Hydrobiology, 85, 5-6, p. 659-668.
57. Baršienė J., Baršytė D. 1999. Genotoxic effects of pollutants in vivo in aquatic systems. In: Metals in the Environment: an integrated approach, ed by D. Lovejoy, Vilnius, 256-260.